Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 AC245100.5-201ENST00000452108 331 ntBASIC14.96□□□□□ -0.01
ABCD3P28288 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
ABCD3P28288 MIR4453-201ENST00000584019 89 ntBASIC14.96□□□□□ -0.01
ABCD3P28288 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 AC015911.4-201ENST00000588022 1070 ntBASIC14.96□□□□□ -0.01
ABCD3P28288 AC003101.2-201ENST00000612557 442 ntBASIC14.96□□□□□ -0.01
ABCD3P28288 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCD3P28288 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCD3P28288 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ABCD3P28288 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ABCD3P28288 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.96□□□□□ -0.02
ABCD3P28288 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCD3P28288 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
ABCD3P28288 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 NFIC-211ENST00000641145 8399 ntBASIC14.95□□□□□ -0.02
ABCD3P28288 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCD3P28288 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ABCD3P28288 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ABCD3P28288 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ABCD3P28288 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.95□□□□□ -0.02
ABCD3P28288 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.95□□□□□ -0.02
ABCD3P28288 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 AC007967.4-201ENST00000614700 386 ntBASIC14.95□□□□□ -0.02
ABCD3P28288 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
ABCD3P28288 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.95□□□□□ -0.02
ABCD3P28288 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCD3P28288 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCD3P28288 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCD3P28288 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCD3P28288 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCD3P28288 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
ABCD3P28288 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ABCD3P28288 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ABCD3P28288 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms