Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.06■□□□□ 0.32
RARAP10276 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RARAP10276 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RARAP10276 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 AC073347.1-201ENST00000421633 2643 ntBASIC17.06■□□□□ 0.32
RARAP10276 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RARAP10276 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RARAP10276 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RARAP10276 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.06■□□□□ 0.32
RARAP10276 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARAP10276 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RARAP10276 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 TSPY26P-202ENST00000565928 3884 ntBASIC17.05■□□□□ 0.32
RARAP10276 WASH6P-202ENST00000359512 1437 ntBASIC17.05■□□□□ 0.32
RARAP10276 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 AC023274.1-201ENST00000418278 595 ntBASIC17.05■□□□□ 0.32
RARAP10276 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 AC099522.2-201ENST00000607001 744 ntBASIC17.05■□□□□ 0.32
RARAP10276 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 AL161645.1-201ENST00000622716 1255 ntBASIC17.05■□□□□ 0.32
RARAP10276 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.05■□□□□ 0.32
RARAP10276 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RARAP10276 AC073439.1-201ENST00000624121 1774 ntBASIC17.05■□□□□ 0.32
RARAP10276 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARAP10276 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
RARAP10276 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RARAP10276 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.04■□□□□ 0.32
RARAP10276 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 AC002056.1-201ENST00000395613 760 ntBASIC17.04■□□□□ 0.32
RARAP10276 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 MIR940-201ENST00000401276 94 ntBASIC17.04■□□□□ 0.32
RARAP10276 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.04■□□□□ 0.32
RARAP10276 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.04■□□□□ 0.32
RARAP10276 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RARAP10276 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RARAP10276 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.04■□□□□ 0.32
RARAP10276 AC013268.4-201ENST00000637413 2228 ntBASIC17.04■□□□□ 0.32
RARAP10276 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARAP10276 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARAP10276 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.03■□□□□ 0.32
RARAP10276 MIR574-201ENST00000385209 96 ntBASIC17.03■□□□□ 0.32
RARAP10276 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RARAP10276 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms