Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 AC007950.2-201ENST00000615045 2347 ntBASIC16.44■□□□□ 0.22
HLA-DQB2P05538 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 AC026150.2-201ENST00000564693 1156 ntBASIC16.43■□□□□ 0.22
HLA-DQB2P05538 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB2P05538 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AC134407.2-201ENST00000625089 1978 ntBASIC16.42■□□□□ 0.22
HLA-DQB2P05538 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB2P05538 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms