Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AC126177.1-201ENST00000547829 2218 ntBASIC18.52■□□□□ 0.56
CLIC4Q9Y696 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AC023274.1-201ENST00000418278 595 ntBASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 FAM197Y3-203ENST00000618346 717 ntBASIC18.52■□□□□ 0.56
CLIC4Q9Y696 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLIC4Q9Y696 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CLIC4Q9Y696 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLIC4Q9Y696 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.52■□□□□ 0.55
CLIC4Q9Y696 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLIC4Q9Y696 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLIC4Q9Y696 AC104640.1-201ENST00000562617 2109 ntBASIC18.52■□□□□ 0.55
CLIC4Q9Y696 AC134407.2-201ENST00000625089 1978 ntBASIC18.51■□□□□ 0.55
CLIC4Q9Y696 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AC092850.2-201ENST00000623821 2697 ntBASIC18.51■□□□□ 0.55
CLIC4Q9Y696 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.51■□□□□ 0.55
CLIC4Q9Y696 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AC026396.1-201ENST00000419388 421 ntBASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AL591424.1-201ENST00000442569 1213 ntBASIC18.51■□□□□ 0.55
CLIC4Q9Y696 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC4Q9Y696 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.51■□□□□ 0.55
CLIC4Q9Y696 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC4Q9Y696 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms