Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 IGHV3-62-201ENST00000520057 340 ntBASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 LINC01225-203ENST00000563550 1244 ntBASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 AC073575.2-201ENST00000614212 627 ntBASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 AC105339.1-204ENST00000636249 355 ntBASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AL589702.1-201ENST00000641229 1509 ntBASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 LINC02199-201ENST00000506655 2702 ntBASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 SPCS2P4-201ENST00000436160 681 ntBASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AC098859.1-201ENST00000502915 1238 ntBASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AL391005.1-201ENST00000623953 2435 ntBASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB13Q9Y5F0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 MIR346-201ENST00000362234 95 ntBASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 RPS20P25-201ENST00000412447 352 ntBASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 AL117351.1-201ENST00000438864 766 ntBASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 AL592309.1-201ENST00000443127 649 ntBASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB13Q9Y5F0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms