Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 AL512361.1-201ENST00000554200 418 ntBASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 TP53TG3HP-202ENST00000569755 579 ntBASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 AP001094.4-201ENST00000579008 2176 ntBASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 AL391825.1-201ENST00000457671 1364 ntBASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1Q9Y2A7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 GGT3P-204ENST00000453783 1664 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 DFFBP1-201ENST00000433250 979 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 KRT17P7-201ENST00000451704 1104 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 AC044860.1-202ENST00000559481 777 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 AC140912.1-201ENST00000577171 1054 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 AC080080.1-201ENST00000625121 2420 ntBASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1Q9Y2A7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 SPDYE19P-201ENST00000338590 713 ntBASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 GK-202ENST00000378941 458 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms