Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ABCA3Q99758 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ABCA3Q99758 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCA3Q99758 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 POM121L10P-201ENST00000436994 1285 ntBASIC21.09■□□□□ 0.97
ABCA3Q99758 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCA3Q99758 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
ABCA3Q99758 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCA3Q99758 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCA3Q99758 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCA3Q99758 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 SERPINA13P-202ENST00000478994 924 ntBASIC21.09■□□□□ 0.97
ABCA3Q99758 AC022217.1-201ENST00000521069 738 ntBASIC21.09■□□□□ 0.97
ABCA3Q99758 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCA3Q99758 KLK11-210ENST00000600362 759 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCA3Q99758 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.09■□□□□ 0.97
ABCA3Q99758 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC21.09■□□□□ 0.97
ABCA3Q99758 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCA3Q99758 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCA3Q99758 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCA3Q99758 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ABCA3Q99758 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.08■□□□□ 0.97
ABCA3Q99758 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
ABCA3Q99758 REXO1L1P-202ENST00000608646 1974 ntBASIC21.08■□□□□ 0.97
ABCA3Q99758 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.08■□□□□ 0.97
ABCA3Q99758 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCA3Q99758 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ABCA3Q99758 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ABCA3Q99758 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ABCA3Q99758 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ABCA3Q99758 ACKR1-201ENST00000368121 1240 ntBASIC21.08■□□□□ 0.97
ABCA3Q99758 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ABCA3Q99758 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
ABCA3Q99758 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCA3Q99758 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCA3Q99758 SPTLC1P5-201ENST00000450718 252 ntBASIC21.08■□□□□ 0.97
ABCA3Q99758 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ABCA3Q99758 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC21.08■□□□□ 0.97
ABCA3Q99758 NAT9-222ENST00000583476 583 ntTSL 3 BASIC21.08■□□□□ 0.97
ABCA3Q99758 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCA3Q99758 NKG7-204ENST00000595217 816 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCA3Q99758 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCA3Q99758 AC015818.8-201ENST00000587907 1519 ntBASIC21.08■□□□□ 0.96
ABCA3Q99758 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ABCA3Q99758 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCA3Q99758 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.08■□□□□ 0.96
ABCA3Q99758 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
ABCA3Q99758 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCA3Q99758 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ABCA3Q99758 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
ABCA3Q99758 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCA3Q99758 AC104982.3-201ENST00000581995 514 ntBASIC21.07■□□□□ 0.96
ABCA3Q99758 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.07■□□□□ 0.96
ABCA3Q99758 KLK3-207ENST00000595952 969 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.07■□□□□ 0.96
ABCA3Q99758 AC073413.1-201ENST00000603927 732 ntBASIC21.07■□□□□ 0.96
ABCA3Q99758 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ABCA3Q99758 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCA3Q99758 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCA3Q99758 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 AC141586.5-201ENST00000624546 2050 ntBASIC21.07■□□□□ 0.96
ABCA3Q99758 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms