Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 AC087499.5-201ENST00000452760 1342 ntBASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ECHDC3Q96DC8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 AL096865.1-201ENST00000606796 927 ntBASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 AL844908.2-201ENST00000609461 460 ntBASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.17■□□□□ 0.18
ECHDC3Q96DC8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AC124067.4-201ENST00000519691 2379 ntBASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 HIST3H2BA-201ENST00000436555 524 ntBASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 BCRP1-201ENST00000444246 691 ntBASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AC009477.1-201ENST00000452936 217 ntBASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 ZNF890P-202ENST00000530367 1156 ntBASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 BNIP3P1-202ENST00000550043 1585 ntBASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
ECHDC3Q96DC8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms