Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AC099522.2-201ENST00000607001 744 ntBASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST2H3AQ71DI3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 AC112191.1-201ENST00000523689 701 ntBASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST2H3AQ71DI3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms