Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AP001005.1-201ENST00000571755 1248 ntBASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 MTDHP4-201ENST00000600287 670 ntBASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AC104692.2-201ENST00000603054 253 ntBASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AD001527.2-201ENST00000622994 785 ntBASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AC148477.8-201ENST00000624298 468 ntBASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AP000867.4-201ENST00000641616 219 ntBASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPP4R4Q6NUP7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AC009336.1-201ENST00000608941 1553 ntBASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AC132938.5-201ENST00000624980 1813 ntBASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 OR7E14P-202ENST00000530490 1290 ntBASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AC021087.4-201ENST00000563761 564 ntBASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPP4R4Q6NUP7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 AC079776.2-201ENST00000641154 1609 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 RPS2P28-201ENST00000314255 741 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 AL031284.1-201ENST00000419297 478 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms