Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 TFAMP1-201ENST00000412727 736 ntBASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 AL513523.2-202ENST00000427283 2040 ntBASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 AKAP8P1-201ENST00000434743 1349 ntBASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HERC4Q5GLZ8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PCDHA1-201ENST00000378133 2726 ntBASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 AC236430.1-201ENST00000402231 743 ntBASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 AC002472.2-201ENST00000442739 958 ntBASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 FAM86C2P-203ENST00000528684 1004 ntBASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 AL138918.1-201ENST00000568306 659 ntBASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HERC4Q5GLZ8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 PRYP6-201ENST00000514804 343 ntBASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 DUX4L27-201ENST00000554796 1261 ntBASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 AL135744.1-201ENST00000565098 629 ntBASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.16■□□□□ 0.5
HERC4Q5GLZ8 AL008721.1-201ENST00000609964 604 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms