Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.03□□□□□ -0.32
KHDC3LQ587J8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 REXO1L8P-201ENST00000604378 1897 ntBASIC13.02□□□□□ -0.32
KHDC3LQ587J8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 CICP23-201ENST00000605013 2741 ntBASIC13.02□□□□□ -0.32
KHDC3LQ587J8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
KHDC3LQ587J8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 RN7SL606P-201ENST00000472779 293 ntBASIC13.02□□□□□ -0.33
KHDC3LQ587J8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 AC090616.6-201ENST00000582640 721 ntBASIC13.02□□□□□ -0.33
KHDC3LQ587J8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.02□□□□□ -0.33
KHDC3LQ587J8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KHDC3LQ587J8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 AC246785.2-201ENST00000432512 513 ntBASIC13.01□□□□□ -0.33
KHDC3LQ587J8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 NUS1P1-201ENST00000446295 882 ntBASIC13.01□□□□□ -0.33
KHDC3LQ587J8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.01□□□□□ -0.33
KHDC3LQ587J8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KHDC3LQ587J8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms