Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 CDC14C-201ENST00000428251 1719 ntBASIC17.12■□□□□ 0.33
DSC1Q08554 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
DSC1Q08554 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.12■□□□□ 0.33
DSC1Q08554 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DSC1Q08554 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DSC1Q08554 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DSC1Q08554 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.11■□□□□ 0.33
DSC1Q08554 HILS1-202ENST00000545329 423 ntBASIC17.11■□□□□ 0.33
DSC1Q08554 AC092552.1-201ENST00000547243 906 ntBASIC17.11■□□□□ 0.33
DSC1Q08554 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.11■□□□□ 0.33
DSC1Q08554 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.11■□□□□ 0.33
DSC1Q08554 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.11■□□□□ 0.33
DSC1Q08554 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.11■□□□□ 0.33
DSC1Q08554 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.11■□□□□ 0.33
DSC1Q08554 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DSC1Q08554 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DSC1Q08554 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
DSC1Q08554 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 HAUS4P1-201ENST00000406739 1145 ntBASIC17.1■□□□□ 0.33
DSC1Q08554 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.1■□□□□ 0.33
DSC1Q08554 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.1■□□□□ 0.33
DSC1Q08554 IGHV3-71-201ENST00000523324 359 ntBASIC17.1■□□□□ 0.33
DSC1Q08554 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.1■□□□□ 0.33
DSC1Q08554 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.1■□□□□ 0.33
DSC1Q08554 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.1■□□□□ 0.33
DSC1Q08554 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 CLK3P2-201ENST00000427566 1453 ntBASIC17.1■□□□□ 0.33
DSC1Q08554 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DSC1Q08554 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.1■□□□□ 0.33
DSC1Q08554 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
DSC1Q08554 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DSC1Q08554 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
DSC1Q08554 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DSC1Q08554 AC134407.2-201ENST00000625089 1978 ntBASIC17.09■□□□□ 0.33
DSC1Q08554 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DSC1Q08554 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DSC1Q08554 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DSC1Q08554 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DSC1Q08554 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DSC1Q08554 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DSC1Q08554 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DSC1Q08554 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DSC1Q08554 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DSC1Q08554 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
DSC1Q08554 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.09■□□□□ 0.33
DSC1Q08554 TTTY23B-201ENST00000442790 549 ntBASIC17.09■□□□□ 0.33
DSC1Q08554 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.09■□□□□ 0.33
DSC1Q08554 AC104596.2-201ENST00000512793 793 ntBASIC17.09■□□□□ 0.33
DSC1Q08554 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.09■□□□□ 0.33
DSC1Q08554 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.09■□□□□ 0.33
DSC1Q08554 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms