Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN7AQ01118 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN7AQ01118 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN7AQ01118 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCN7AQ01118 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
SCN7AQ01118 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.83■□□□□ 0.76
SCN7AQ01118 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.83■□□□□ 0.76
SCN7AQ01118 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.83■□□□□ 0.76
SCN7AQ01118 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.83■□□□□ 0.76
SCN7AQ01118 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SCN7AQ01118 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SCN7AQ01118 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SCN7AQ01118 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.83■□□□□ 0.76
SCN7AQ01118 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.83■□□□□ 0.76
SCN7AQ01118 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCN7AQ01118 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
SCN7AQ01118 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.82■□□□□ 0.76
SCN7AQ01118 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.82■□□□□ 0.76
SCN7AQ01118 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.82■□□□□ 0.76
SCN7AQ01118 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.82■□□□□ 0.76
SCN7AQ01118 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SCN7AQ01118 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN7AQ01118 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN7AQ01118 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN7AQ01118 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN7AQ01118 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
SCN7AQ01118 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN7AQ01118 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.82■□□□□ 0.76
SCN7AQ01118 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
SCN7AQ01118 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SCN7AQ01118 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SCN7AQ01118 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN7AQ01118 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN7AQ01118 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SCN7AQ01118 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN7AQ01118 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN7AQ01118 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCN7AQ01118 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SCN7AQ01118 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SCN7AQ01118 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN7AQ01118 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN7AQ01118 PFN1P12-201ENST00000455938 534 ntBASIC19.81■□□□□ 0.76
SCN7AQ01118 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN7AQ01118 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN7AQ01118 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN7AQ01118 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN7AQ01118 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCN7AQ01118 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN7AQ01118 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN7AQ01118 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN7AQ01118 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN7AQ01118 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN7AQ01118 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN7AQ01118 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN7AQ01118 RNF165-205ENST00000588679 2904 ntBASIC19.8■□□□□ 0.76
SCN7AQ01118 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms