Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TMEM14DP-201ENST00000422205 345 ntBASIC19.01■□□□□ 0.63
RHBDL3P58872 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.01■□□□□ 0.63
RHBDL3P58872 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDL3P58872 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.01■□□□□ 0.63
RHBDL3P58872 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.01■□□□□ 0.63
RHBDL3P58872 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.01■□□□□ 0.63
RHBDL3P58872 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
RHBDL3P58872 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.01■□□□□ 0.63
RHBDL3P58872 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.01■□□□□ 0.63
RHBDL3P58872 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RHBDL3P58872 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RHBDL3P58872 CLK3P2-201ENST00000427566 1453 ntBASIC19.01■□□□□ 0.63
RHBDL3P58872 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.01■□□□□ 0.63
RHBDL3P58872 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 REXO1L1P-202ENST00000608646 1974 ntBASIC19.01■□□□□ 0.63
RHBDL3P58872 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDL3P58872 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 AC006449.6-201ENST00000612330 2296 ntBASIC19■□□□□ 0.63
RHBDL3P58872 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19■□□□□ 0.63
RHBDL3P58872 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19■□□□□ 0.63
RHBDL3P58872 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 ATP5G2P4-201ENST00000442175 420 ntBASIC19■□□□□ 0.63
RHBDL3P58872 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 PHKG1P2-201ENST00000457537 863 ntBASIC19■□□□□ 0.63
RHBDL3P58872 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19■□□□□ 0.63
RHBDL3P58872 HNRNPUP1-201ENST00000554987 333 ntBASIC19■□□□□ 0.63
RHBDL3P58872 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19■□□□□ 0.63
RHBDL3P58872 AC106886.1-201ENST00000568660 600 ntBASIC19■□□□□ 0.63
RHBDL3P58872 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19■□□□□ 0.63
RHBDL3P58872 AL359881.2-201ENST00000602973 570 ntBASIC19■□□□□ 0.63
RHBDL3P58872 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19■□□□□ 0.63
RHBDL3P58872 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RHBDL3P58872 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDL3P58872 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RHBDL3P58872 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.99■□□□□ 0.63
RHBDL3P58872 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RHBDL3P58872 TOMM22P5-201ENST00000416399 439 ntBASIC18.99■□□□□ 0.63
RHBDL3P58872 AC136604.1-201ENST00000418535 575 ntBASIC18.99■□□□□ 0.63
RHBDL3P58872 AC007274.1-201ENST00000439805 662 ntBASIC18.99■□□□□ 0.63
RHBDL3P58872 GPR53P-205ENST00000457298 1084 ntBASIC18.99■□□□□ 0.63
RHBDL3P58872 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.99■□□□□ 0.63
RHBDL3P58872 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RHBDL3P58872 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RHBDL3P58872 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.99■□□□□ 0.63
RHBDL3P58872 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
RHBDL3P58872 AC097359.3-201ENST00000603982 1210 ntBASIC18.99■□□□□ 0.63
RHBDL3P58872 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.99■□□□□ 0.63
RHBDL3P58872 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
RHBDL3P58872 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RHBDL3P58872 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDL3P58872 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.98■□□□□ 0.63
RHBDL3P58872 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHBDL3P58872 NKILA-202ENST00000614771 2598 ntBASIC18.98■□□□□ 0.63
RHBDL3P58872 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHBDL3P58872 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RHBDL3P58872 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RHBDL3P58872 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RHBDL3P58872 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms