Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 AC078925.2-201ENST00000624013 1973 ntBASIC11.9□□□□□ -0.5
APOC4P55056 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
APOC4P55056 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
APOC4P55056 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
APOC4P55056 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOC4P55056 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOC4P55056 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
APOC4P55056 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
APOC4P55056 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 AC092580.3-201ENST00000430932 139 ntBASIC11.89□□□□□ -0.51
APOC4P55056 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.89□□□□□ -0.51
APOC4P55056 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC4P55056 TSPY16P-201ENST00000449843 468 ntBASIC11.89□□□□□ -0.51
APOC4P55056 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC4P55056 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC4P55056 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.89□□□□□ -0.51
APOC4P55056 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC4P55056 MIR4321-201ENST00000592276 80 ntBASIC11.89□□□□□ -0.51
APOC4P55056 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 AC009118.2-201ENST00000613275 655 ntBASIC11.89□□□□□ -0.51
APOC4P55056 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
APOC4P55056 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC4P55056 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC4P55056 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC4P55056 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC4P55056 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
APOC4P55056 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms