Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 AC254562.1-201ENST00000417586 456 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 KRT18P32-201ENST00000424695 1287 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 AP006288.1-201ENST00000446065 395 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 AC004967.1-201ENST00000453589 447 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ERCC2P18074 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC2P18074 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC2P18074 RNA5SP410-201ENST00000516285 106 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC2P18074 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
ERCC2P18074 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.72■□□□□ 0.27
ERCC2P18074 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 CDC14C-201ENST00000428251 1719 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ERCC2P18074 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 AC069224.1-201ENST00000566372 1715 ntBASIC16.71■□□□□ 0.27
ERCC2P18074 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 HLA-H-201ENST00000383620 1096 ntBASIC16.71■□□□□ 0.27
ERCC2P18074 MIR1233-2-201ENST00000408138 82 ntBASIC16.71■□□□□ 0.27
ERCC2P18074 MIR1233-1-201ENST00000408722 82 ntBASIC16.71■□□□□ 0.27
ERCC2P18074 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC2P18074 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.71■□□□□ 0.27
ERCC2P18074 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC2P18074 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ERCC2P18074 LINC02447-202ENST00000501888 2146 ntBASIC16.71■□□□□ 0.27
ERCC2P18074 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ERCC2P18074 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ERCC2P18074 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC2P18074 AL365203.3-201ENST00000609742 2057 ntBASIC16.71■□□□□ 0.27
ERCC2P18074 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
ERCC2P18074 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.71■□□□□ 0.26
ERCC2P18074 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC2P18074 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 AC008677.1-201ENST00000519230 1561 ntBASIC16.7■□□□□ 0.26
ERCC2P18074 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
ERCC2P18074 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC2P18074 HAUS4P1-201ENST00000406739 1145 ntBASIC16.7■□□□□ 0.26
ERCC2P18074 CNN2P11-201ENST00000429351 262 ntBASIC16.7■□□□□ 0.26
ERCC2P18074 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC2P18074 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC2P18074 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC2P18074 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms