Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SCG2P13521 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.65■□□□□ 0.58
SCG2P13521 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 PCDHA1-201ENST00000378133 2726 ntBASIC18.65■□□□□ 0.58
SCG2P13521 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.65■□□□□ 0.58
SCG2P13521 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.65■□□□□ 0.58
SCG2P13521 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.65■□□□□ 0.58
SCG2P13521 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.65■□□□□ 0.58
SCG2P13521 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 AC025678.2-201ENST00000562061 970 ntBASIC18.65■□□□□ 0.58
SCG2P13521 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.65■□□□□ 0.58
SCG2P13521 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.65■□□□□ 0.58
SCG2P13521 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.65■□□□□ 0.58
SCG2P13521 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SCG2P13521 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.65■□□□□ 0.58
SCG2P13521 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SCG2P13521 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
SCG2P13521 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG2P13521 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCG2P13521 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCG2P13521 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.64■□□□□ 0.58
SCG2P13521 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SCG2P13521 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 CDC14C-201ENST00000428251 1719 ntBASIC18.64■□□□□ 0.57
SCG2P13521 AL136982.4-201ENST00000437689 1740 ntBASIC18.64■□□□□ 0.57
SCG2P13521 AC069224.1-201ENST00000566372 1715 ntBASIC18.64■□□□□ 0.57
SCG2P13521 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.64■□□□□ 0.57
SCG2P13521 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SCG2P13521 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SCG2P13521 MIR770-201ENST00000390219 98 ntBASIC18.64■□□□□ 0.57
SCG2P13521 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.64■□□□□ 0.57
SCG2P13521 AC105021.1-202ENST00000570572 669 ntBASIC18.64■□□□□ 0.57
SCG2P13521 MIR3197-201ENST00000582241 73 ntBASIC18.64■□□□□ 0.57
SCG2P13521 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.64■□□□□ 0.57
SCG2P13521 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.64■□□□□ 0.57
SCG2P13521 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 AL691432.1-201ENST00000596308 1422 ntBASIC18.64■□□□□ 0.57
SCG2P13521 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.64■□□□□ 0.57
SCG2P13521 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCG2P13521 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SCG2P13521 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.63■□□□□ 0.57
SCG2P13521 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.63■□□□□ 0.57
SCG2P13521 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SCG2P13521 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.63■□□□□ 0.57
SCG2P13521 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.63■□□□□ 0.57
SCG2P13521 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCG2P13521 AL139010.1-201ENST00000454878 894 ntBASIC18.63■□□□□ 0.57
SCG2P13521 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.63■□□□□ 0.57
SCG2P13521 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.63■□□□□ 0.57
SCG2P13521 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.63■□□□□ 0.57
SCG2P13521 AC015911.4-201ENST00000588022 1070 ntBASIC18.63■□□□□ 0.57
SCG2P13521 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SCG2P13521 AC026979.3-201ENST00000607315 403 ntBASIC18.63■□□□□ 0.57
SCG2P13521 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.63■□□□□ 0.57
SCG2P13521 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.63■□□□□ 0.57
SCG2P13521 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.63■□□□□ 0.57
SCG2P13521 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms