Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PTP4A1P2-201ENST00000546033 454 ntBASIC18.15■□□□□ 0.5
COL11A1P12107 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL11A1P12107 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL11A1P12107 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL11A1P12107 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.15■□□□□ 0.5
COL11A1P12107 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL11A1P12107 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
COL11A1P12107 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
COL11A1P12107 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.14■□□□□ 0.5
COL11A1P12107 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 AL133267.1-201ENST00000398220 340 ntBASIC18.14■□□□□ 0.5
COL11A1P12107 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.14■□□□□ 0.5
COL11A1P12107 CTBP2P5-201ENST00000454986 1264 ntBASIC18.14■□□□□ 0.5
COL11A1P12107 VDAC1P7-201ENST00000462417 847 ntBASIC18.14■□□□□ 0.5
COL11A1P12107 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.14■□□□□ 0.5
COL11A1P12107 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.14■□□□□ 0.5
COL11A1P12107 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.14■□□□□ 0.5
COL11A1P12107 AC000095.1-201ENST00000603208 874 ntBASIC18.14■□□□□ 0.5
COL11A1P12107 AC005252.2-201ENST00000624630 1141 ntBASIC18.14■□□□□ 0.5
COL11A1P12107 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL11A1P12107 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.14■□□□□ 0.49
COL11A1P12107 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.14■□□□□ 0.49
COL11A1P12107 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.14■□□□□ 0.49
COL11A1P12107 AL355994.2-201ENST00000447882 704 ntBASIC18.14■□□□□ 0.49
COL11A1P12107 AC022494.1-201ENST00000466044 728 ntBASIC18.14■□□□□ 0.49
COL11A1P12107 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.14■□□□□ 0.49
COL11A1P12107 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.14■□□□□ 0.49
COL11A1P12107 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.14■□□□□ 0.49
COL11A1P12107 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL11A1P12107 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL11A1P12107 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL11A1P12107 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.13■□□□□ 0.49
COL11A1P12107 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.13■□□□□ 0.49
COL11A1P12107 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.13■□□□□ 0.49
COL11A1P12107 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.13■□□□□ 0.49
COL11A1P12107 AC099336.1-201ENST00000417053 1171 ntBASIC18.13■□□□□ 0.49
COL11A1P12107 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.13■□□□□ 0.49
COL11A1P12107 AC012441.1-201ENST00000446669 685 ntBASIC18.13■□□□□ 0.49
COL11A1P12107 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL11A1P12107 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.13■□□□□ 0.49
COL11A1P12107 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.13■□□□□ 0.49
COL11A1P12107 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.13■□□□□ 0.49
COL11A1P12107 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL11A1P12107 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.13■□□□□ 0.49
COL11A1P12107 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
COL11A1P12107 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.12■□□□□ 0.49
COL11A1P12107 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
COL11A1P12107 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.12■□□□□ 0.49
COL11A1P12107 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL11A1P12107 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.12■□□□□ 0.49
COL11A1P12107 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 AL355864.2-201ENST00000447420 863 ntBASIC18.12■□□□□ 0.49
COL11A1P12107 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 AC015910.1-201ENST00000579400 975 ntBASIC18.12■□□□□ 0.49
COL11A1P12107 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.12■□□□□ 0.49
COL11A1P12107 AC133552.6-201ENST00000613406 534 ntBASIC18.12■□□□□ 0.49
COL11A1P12107 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL11A1P12107 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms