Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 AC008894.3-201ENST00000624324 3103 ntBASIC17.44■□□□□ 0.38
CSPG5O95196 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 SLC7A15P-201ENST00000424028 1363 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 PCDHB17P-201ENST00000539533 2393 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG5O95196 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CSPG5O95196 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.43■□□□□ 0.38
CSPG5O95196 AC234783.1-201ENST00000441761 496 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG5O95196 CROCCP4-201ENST00000457096 498 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG5O95196 AC055876.2-201ENST00000531834 546 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 AC123567.1-201ENST00000548294 1261 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CSPG5O95196 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CSPG5O95196 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CSPG5O95196 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CSPG5O95196 AC004461.2-201ENST00000629517 803 ntBASIC17.43■□□□□ 0.38
CSPG5O95196 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSPG5O95196 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CSPG5O95196 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
CSPG5O95196 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG5O95196 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 REXO1L6P-201ENST00000603433 1515 ntBASIC17.42■□□□□ 0.38
CSPG5O95196 AL391825.1-201ENST00000457671 1364 ntBASIC17.42■□□□□ 0.38
CSPG5O95196 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CSPG5O95196 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CSPG5O95196 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 AC098850.1-201ENST00000419919 790 ntBASIC17.42■□□□□ 0.38
CSPG5O95196 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.42■□□□□ 0.38
CSPG5O95196 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 AL512343.1-201ENST00000605837 169 ntBASIC17.42■□□□□ 0.38
CSPG5O95196 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.42■□□□□ 0.38
CSPG5O95196 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms