Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.66■■□□□ 1.22
MSH5O43196 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.66■■□□□ 1.22
MSH5O43196 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC22.66■■□□□ 1.22
MSH5O43196 VDAC1P12-201ENST00000451853 882 ntBASIC22.66■■□□□ 1.22
MSH5O43196 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MSH5O43196 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.66■■□□□ 1.22
MSH5O43196 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.66■■□□□ 1.22
MSH5O43196 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.66■■□□□ 1.22
MSH5O43196 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.66■■□□□ 1.22
MSH5O43196 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.66■■□□□ 1.22
MSH5O43196 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC22.66■■□□□ 1.22
MSH5O43196 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
MSH5O43196 AC019226.2-201ENST00000625973 424 ntBASIC22.66■■□□□ 1.22
MSH5O43196 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC22.66■■□□□ 1.22
MSH5O43196 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC22.66■■□□□ 1.22
MSH5O43196 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MSH5O43196 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
MSH5O43196 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MSH5O43196 AC006504.4-201ENST00000592118 1568 ntBASIC22.66■■□□□ 1.22
MSH5O43196 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MSH5O43196 HCG11-201ENST00000411553 5696 ntBASIC22.66■■□□□ 1.22
MSH5O43196 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MSH5O43196 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC22.65■■□□□ 1.22
MSH5O43196 HTR7P1-202ENST00000624664 4411 ntBASIC22.65■■□□□ 1.22
MSH5O43196 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 NDUFA5P10-201ENST00000432147 357 ntBASIC22.65■■□□□ 1.22
MSH5O43196 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC22.65■■□□□ 1.22
MSH5O43196 NPM1P49-201ENST00000448027 714 ntBASIC22.65■■□□□ 1.22
MSH5O43196 AC009502.2-201ENST00000452903 766 ntBASIC22.65■■□□□ 1.22
MSH5O43196 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC22.65■■□□□ 1.22
MSH5O43196 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 AL121594.4-201ENST00000556211 1196 ntBASIC22.65■■□□□ 1.22
MSH5O43196 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.65■■□□□ 1.22
MSH5O43196 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 AC092474.3-201ENST00000603022 568 ntBASIC22.65■■□□□ 1.22
MSH5O43196 AC112220.2-201ENST00000605513 533 ntBASIC22.65■■□□□ 1.22
MSH5O43196 RNU4-5P-201ENST00000607255 135 ntBASIC22.65■■□□□ 1.22
MSH5O43196 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 WT1-AS_8.1-201ENST00000615200 275 ntBASIC22.65■■□□□ 1.22
MSH5O43196 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
MSH5O43196 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
MSH5O43196 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH5O43196 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
MSH5O43196 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
MSH5O43196 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MSH5O43196 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MSH5O43196 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MSH5O43196 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC22.64■■□□□ 1.22
MSH5O43196 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
MSH5O43196 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.64■■□□□ 1.21
MSH5O43196 AL139400.1-201ENST00000366220 510 ntBASIC22.64■■□□□ 1.21
MSH5O43196 RNY3P9-201ENST00000384727 106 ntBASIC22.64■■□□□ 1.21
MSH5O43196 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC22.64■■□□□ 1.21
MSH5O43196 ELK2BP-201ENST00000415014 1224 ntBASIC22.64■■□□□ 1.21
MSH5O43196 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC22.64■■□□□ 1.21
MSH5O43196 AL732372.2-201ENST00000431321 437 ntTSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 AC114402.2-201ENST00000432760 643 ntBASIC22.64■■□□□ 1.21
MSH5O43196 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.64■■□□□ 1.21
MSH5O43196 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.64■■□□□ 1.21
MSH5O43196 HCG4B-203ENST00000450128 991 ntBASIC22.64■■□□□ 1.21
MSH5O43196 PRYP5-201ENST00000451909 266 ntBASIC22.64■■□□□ 1.21
MSH5O43196 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC22.64■■□□□ 1.21
MSH5O43196 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.64■■□□□ 1.21
MSH5O43196 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 MTATP6P9-201ENST00000515039 680 ntBASIC22.64■■□□□ 1.21
MSH5O43196 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSH5O43196 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC22.64■■□□□ 1.21
MSH5O43196 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC22.64■■□□□ 1.21
MSH5O43196 AP001372.4-201ENST00000524889 472 ntBASIC22.64■■□□□ 1.21
MSH5O43196 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.64■■□□□ 1.21
MSH5O43196 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
MSH5O43196 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC22.64■■□□□ 1.21
MSH5O43196 MTATP6P24-201ENST00000576835 677 ntBASIC22.64■■□□□ 1.21
MSH5O43196 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC22.64■■□□□ 1.21
MSH5O43196 AL445435.1-201ENST00000604232 665 ntBASIC22.64■■□□□ 1.21
MSH5O43196 AP002360.4-201ENST00000606980 481 ntBASIC22.64■■□□□ 1.21
MSH5O43196 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 AC004790.2-201ENST00000623588 572 ntBASIC22.64■■□□□ 1.21
MSH5O43196 AC099654.9-201ENST00000637055 678 ntBASIC22.64■■□□□ 1.21
MSH5O43196 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSH5O43196 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC22.64■■□□□ 1.21
MSH5O43196 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.64■■□□□ 1.21
MSH5O43196 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSH5O43196 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms