Protein–RNA interactions for Protein: Q9Y2D1

ATF5, Cyclic AMP-dependent transcription factor ATF-5, humanhuman

Predicted RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF5Q9Y2D1 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 FO393414.2-201ENST00000405153 598 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 SOCS2P1-201ENST00000417727 557 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AC091804.1-201ENST00000486888 567 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AP006547.1-201ENST00000563435 692 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AC009486.1-201ENST00000569860 813 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AC097724.1-201ENST00000609581 426 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 AC097655.1-201ENST00000635075 318 ntBASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ATF5Q9Y2D1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 AC004898.1-201ENST00000451057 766 ntBASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 EAF2-202ENST00000451944 960 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 AC093433.1-201ENST00000458048 571 ntBASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 AC018635.1-201ENST00000468292 1030 ntBASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 MIR3619-201ENST00000579667 83 ntBASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 AC138627.1-207ENST00000641560 1006 ntBASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ATF5Q9Y2D1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 ATG10-IT1-201ENST00000396880 487 ntBASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 AC104982.3-201ENST00000581995 514 ntBASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF5Q9Y2D1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms