Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PGAM5P1-201ENST00000518923 814 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 PDPK2P-202ENST00000562415 1191 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 AC002347.1-201ENST00000569543 541 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 AL513190.1-201ENST00000621254 727 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 AC092865.6-201ENST00000642101 219 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 AC126177.1-201ENST00000547829 2218 ntBASIC15.43■□□□□ 0.06
COL21A1Q96P44 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 AC074386.1-202ENST00000463561 864 ntBASIC15.43■□□□□ 0.06
COL21A1Q96P44 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 LINC01144-201ENST00000626198 1710 ntBASIC15.43■□□□□ 0.06
COL21A1Q96P44 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL21A1Q96P44 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.43■□□□□ 0.06
COL21A1Q96P44 AC063926.3-201ENST00000624734 5658 ntBASIC15.42■□□□□ 0.06
COL21A1Q96P44 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
COL21A1Q96P44 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL21A1Q96P44 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms