Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 AP006288.1-201ENST00000446065 395 ntBASIC16.55■□□□□ 0.24
RTP4Q96DX8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 AC105233.2-201ENST00000523697 349 ntBASIC16.55■□□□□ 0.24
RTP4Q96DX8 AF228730.5-201ENST00000530288 346 ntBASIC16.55■□□□□ 0.24
RTP4Q96DX8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 AC005829.1-201ENST00000570002 483 ntBASIC16.55■□□□□ 0.24
RTP4Q96DX8 AC061975.2-201ENST00000581722 295 ntBASIC16.55■□□□□ 0.24
RTP4Q96DX8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 PKD1P1-201ENST00000458669 6805 ntBASIC16.55■□□□□ 0.24
RTP4Q96DX8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTP4Q96DX8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RTP4Q96DX8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
RTP4Q96DX8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTP4Q96DX8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTP4Q96DX8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTP4Q96DX8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTP4Q96DX8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTP4Q96DX8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
RTP4Q96DX8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms