Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 IGHV3-42-201ENST00000520410 361 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 AC069120.2-201ENST00000524091 540 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 AC138761.1-201ENST00000584393 385 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 AL158211.3-201ENST00000607385 239 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 TUBB8P12-201ENST00000308911 1335 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 TUBB7P-202ENST00000428444 1305 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 TUBB8P7-204ENST00000567960 1332 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 AC105233.2-201ENST00000523697 349 ntBASIC17.17■□□□□ 0.34
ATP2A3Q93084 AF228730.5-201ENST00000530288 346 ntBASIC17.17■□□□□ 0.34
ATP2A3Q93084 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 LINC00895-201ENST00000629028 1637 ntBASIC17.17■□□□□ 0.34
ATP2A3Q93084 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A3Q93084 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A3Q93084 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 AL390754.1-201ENST00000619088 582 ntBASIC17.16■□□□□ 0.34
ATP2A3Q93084 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms