Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 AL671277.1-201ENST00000429656 993 ntBASIC15.24■□□□□ 0.03
NUP43Q8NFH3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NUP43Q8NFH3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 TFAMP1-201ENST00000412727 736 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 AL355306.1-201ENST00000415580 579 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 PGAM5P1-201ENST00000518923 814 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 AL138918.1-201ENST00000568306 659 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 PAUPAR-201ENST00000630360 2965 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 AC069224.1-201ENST00000566372 1715 ntBASIC15.23■□□□□ 0.03
NUP43Q8NFH3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.23■□□□□ 0.03
NUP43Q8NFH3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AC112504.1-201ENST00000623415 1841 ntBASIC15.22■□□□□ 0.03
NUP43Q8NFH3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
NUP43Q8NFH3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms