Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00311Q8N616 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00311Q8N616 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00311Q8N616 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AP3S2-216ENST00000617003 1561 ntBASIC13.16□□□□□ -0.3
LINC00311Q8N616 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AL691432.1-201ENST00000596308 1422 ntBASIC13.16□□□□□ -0.3
LINC00311Q8N616 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC004461.1-201ENST00000412461 403 ntBASIC13.16□□□□□ -0.3
LINC00311Q8N616 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 RPS8P6-201ENST00000426177 609 ntBASIC13.16□□□□□ -0.3
LINC00311Q8N616 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC005237.2-201ENST00000434368 219 ntBASIC13.16□□□□□ -0.3
LINC00311Q8N616 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AC026979.3-201ENST00000607315 403 ntBASIC13.16□□□□□ -0.3
LINC00311Q8N616 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00311Q8N616 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00311Q8N616 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC004987.2-201ENST00000395959 1148 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC211486.1-202ENST00000416371 468 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 AL627223.1-201ENST00000416693 442 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 AL139010.1-201ENST00000454878 894 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC211476.1-201ENST00000503899 468 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 RARRES2P9-201ENST00000565168 469 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 AC004835.2-201ENST00000603762 682 ntBASIC13.15□□□□□ -0.3
LINC00311Q8N616 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00311Q8N616 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00311Q8N616 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms