Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SIX5Q8N196 AC018665.1-201ENST00000622927 1362 ntBASIC16.64■□□□□ 0.26
SIX5Q8N196 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SIX5Q8N196 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX5Q8N196 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX5Q8N196 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX5Q8N196 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SIX5Q8N196 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 CTBP2P5-201ENST00000454986 1264 ntBASIC16.64■□□□□ 0.25
SIX5Q8N196 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.64■□□□□ 0.25
SIX5Q8N196 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.64■□□□□ 0.25
SIX5Q8N196 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX5Q8N196 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.64■□□□□ 0.25
SIX5Q8N196 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.64■□□□□ 0.25
SIX5Q8N196 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX5Q8N196 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 AL354751.1-201ENST00000412768 1863 ntBASIC16.64■□□□□ 0.25
SIX5Q8N196 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SIX5Q8N196 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.64■□□□□ 0.25
SIX5Q8N196 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.64■□□□□ 0.25
SIX5Q8N196 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX5Q8N196 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.64■□□□□ 0.25
SIX5Q8N196 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.63■□□□□ 0.25
SIX5Q8N196 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.63■□□□□ 0.25
SIX5Q8N196 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SIX5Q8N196 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.63■□□□□ 0.25
SIX5Q8N196 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SIX5Q8N196 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.63■□□□□ 0.25
SIX5Q8N196 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.63■□□□□ 0.25
SIX5Q8N196 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.63■□□□□ 0.25
SIX5Q8N196 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SIX5Q8N196 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.63■□□□□ 0.25
SIX5Q8N196 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SIX5Q8N196 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.63■□□□□ 0.25
SIX5Q8N196 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.63■□□□□ 0.25
SIX5Q8N196 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.63■□□□□ 0.25
SIX5Q8N196 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SIX5Q8N196 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SIX5Q8N196 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX5Q8N196 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.63■□□□□ 0.25
SIX5Q8N196 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SIX5Q8N196 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SIX5Q8N196 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX5Q8N196 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 AL162727.3-201ENST00000635661 2787 ntBASIC16.62■□□□□ 0.25
SIX5Q8N196 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
SIX5Q8N196 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX5Q8N196 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms