Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 USP32P1-208ENST00000506594 1164 ntBASIC17.53■□□□□ 0.4
HERC6Q8IVU3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 RARRES2P5-201ENST00000564013 466 ntBASIC17.53■□□□□ 0.4
HERC6Q8IVU3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 KRT8P44-201ENST00000441609 1350 ntBASIC17.53■□□□□ 0.4
HERC6Q8IVU3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.53■□□□□ 0.4
HERC6Q8IVU3 AC018665.1-201ENST00000622927 1362 ntBASIC17.53■□□□□ 0.4
HERC6Q8IVU3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 MIR1908-201ENST00000410394 80 ntBASIC17.52■□□□□ 0.4
HERC6Q8IVU3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AL583810.1-201ENST00000553344 1045 ntBASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 MIR6869-201ENST00000619434 62 ntBASIC17.52■□□□□ 0.4
HERC6Q8IVU3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HERC6Q8IVU3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.52■□□□□ 0.39
HERC6Q8IVU3 PP12613-201ENST00000424958 2230 ntBASIC17.52■□□□□ 0.39
HERC6Q8IVU3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HERC6Q8IVU3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HERC6Q8IVU3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC025048.3-201ENST00000590609 569 ntBASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC233724.13-201ENST00000598383 410 ntBASIC17.51■□□□□ 0.39
HERC6Q8IVU3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 AC005702.4-201ENST00000618393 416 ntBASIC17.51■□□□□ 0.39
HERC6Q8IVU3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.51■□□□□ 0.39
HERC6Q8IVU3 RPSAP52-203ENST00000622976 1023 ntBASIC17.51■□□□□ 0.39
HERC6Q8IVU3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms