Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 PCDHA12-202ENST00000613593 2588 ntBASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 FLJ38576-201ENST00000623820 2459 ntBASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 CSF2RBP1-201ENST00000447905 391 ntBASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OTOP1Q7RTM1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.71■□□□□ 0.58
OTOP1Q7RTM1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
OTOP1Q7RTM1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
OTOP1Q7RTM1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 AL031731.1-201ENST00000642131 2094 ntBASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 RNA5SP423-201ENST00000517127 109 ntBASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 SLC25A47P1-201ENST00000531577 414 ntBASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 CLK3P2-201ENST00000427566 1453 ntBASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OTOP1Q7RTM1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 HLA-A-202ENST00000376806 1854 ntBASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 SPDYE17-201ENST00000412399 783 ntBASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OTOP1Q7RTM1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms