Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 LINC02228-204ENST00000642115 2962 ntBASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AC016027.1-202ENST00000607927 1699 ntBASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NHLRC1Q6VVB1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 AC002056.1-201ENST00000395613 760 ntBASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 AC004832.2-201ENST00000426397 482 ntBASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 POLD2P1-201ENST00000511220 997 ntBASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 AC092902.6-201ENST00000641783 218 ntBASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 WASH6P-202ENST00000359512 1437 ntBASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 AC006449.6-201ENST00000612330 2296 ntBASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NHLRC1Q6VVB1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 ADH5P3-201ENST00000433842 1137 ntBASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 AC040169.1-201ENST00000565382 521 ntBASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 AL161645.1-201ENST00000622716 1255 ntBASIC14.65□□□□□ -0.06
NHLRC1Q6VVB1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms