Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CASC4Q6P4E1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 AL450487.1-201ENST00000426799 995 ntBASIC16.67■□□□□ 0.26
CASC4Q6P4E1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 AC098831.1-202ENST00000438821 336 ntBASIC16.67■□□□□ 0.26
CASC4Q6P4E1 FAAHP1-202ENST00000446499 1238 ntBASIC16.67■□□□□ 0.26
CASC4Q6P4E1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 AC093909.1-201ENST00000504731 1122 ntBASIC16.67■□□□□ 0.26
CASC4Q6P4E1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 AL031055.1-201ENST00000606362 631 ntBASIC16.67■□□□□ 0.26
CASC4Q6P4E1 AC021097.1-201ENST00000607902 574 ntBASIC16.67■□□□□ 0.26
CASC4Q6P4E1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CASC4Q6P4E1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 RNU1-129P-201ENST00000384064 167 ntBASIC16.66■□□□□ 0.26
CASC4Q6P4E1 HMGA1P7-201ENST00000406908 502 ntBASIC16.66■□□□□ 0.26
CASC4Q6P4E1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 AP002469.2-201ENST00000531724 424 ntBASIC16.66■□□□□ 0.26
CASC4Q6P4E1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 U1.21-201ENST00000580816 167 ntBASIC16.66■□□□□ 0.26
CASC4Q6P4E1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 MIR7706-201ENST00000613747 67 ntBASIC16.66■□□□□ 0.26
CASC4Q6P4E1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.66■□□□□ 0.26
CASC4Q6P4E1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 AL160237.2-201ENST00000556165 472 ntBASIC16.65■□□□□ 0.26
CASC4Q6P4E1 AL031432.2-201ENST00000566714 459 ntBASIC16.65■□□□□ 0.26
CASC4Q6P4E1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 AL928711.1-201ENST00000570165 459 ntBASIC16.65■□□□□ 0.26
CASC4Q6P4E1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 AL645728.2-201ENST00000641974 660 ntBASIC16.65■□□□□ 0.26
CASC4Q6P4E1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms