Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 AL136317.3-201ENST00000618497 906 ntBASIC21.07■□□□□ 0.96
CCDC27Q2M243 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC27Q2M243 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC27Q2M243 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 AC092183.1-201ENST00000469884 875 ntBASIC21.06■□□□□ 0.96
CCDC27Q2M243 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 AC093028.1-201ENST00000622998 982 ntBASIC21.06■□□□□ 0.96
CCDC27Q2M243 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC27Q2M243 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC27Q2M243 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.05■□□□□ 0.96
CCDC27Q2M243 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC27Q2M243 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC27Q2M243 TUBB3P1-201ENST00000405796 1332 ntBASIC21.04■□□□□ 0.96
CCDC27Q2M243 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 KRT8P37-201ENST00000451609 1420 ntBASIC21.04■□□□□ 0.96
CCDC27Q2M243 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 AC018695.7-201ENST00000624587 2492 ntBASIC21.04■□□□□ 0.96
CCDC27Q2M243 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 HIST3H2BA-201ENST00000436555 524 ntBASIC21.04■□□□□ 0.96
CCDC27Q2M243 METTL21AP1-201ENST00000438852 635 ntBASIC21.04■□□□□ 0.96
CCDC27Q2M243 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 KRT8P12-202ENST00000472924 1397 ntBASIC21.04■□□□□ 0.96
CCDC27Q2M243 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms