Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 TMEM14DP-201ENST00000422205 345 ntBASIC13.98□□□□□ -0.17
ABCA4P78363 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.98□□□□□ -0.17
ABCA4P78363 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 NOC2LP2-201ENST00000407594 1944 ntBASIC13.97□□□□□ -0.17
ABCA4P78363 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 AC011495.1-201ENST00000498085 584 ntBASIC13.97□□□□□ -0.17
ABCA4P78363 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ABCA4P78363 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.97□□□□□ -0.17
ABCA4P78363 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 AC026471.1-201ENST00000564629 3026 ntBASIC13.97□□□□□ -0.17
ABCA4P78363 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 MYCLP2-201ENST00000449268 967 ntBASIC13.97□□□□□ -0.17
ABCA4P78363 USP32P1-208ENST00000506594 1164 ntBASIC13.97□□□□□ -0.17
ABCA4P78363 SPDYE18-201ENST00000510091 1050 ntBASIC13.97□□□□□ -0.17
ABCA4P78363 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.97□□□□□ -0.17
ABCA4P78363 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA4P78363 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ABCA4P78363 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA4P78363 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA4P78363 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ABCA4P78363 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA4P78363 GPAA1P2-202ENST00000606848 1787 ntBASIC13.96□□□□□ -0.17
ABCA4P78363 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.96□□□□□ -0.17
ABCA4P78363 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCA4P78363 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 MEP1AP4-201ENST00000423244 1087 ntBASIC13.96□□□□□ -0.17
ABCA4P78363 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.96□□□□□ -0.17
ABCA4P78363 ELK1P1-201ENST00000485699 580 ntBASIC13.96□□□□□ -0.17
ABCA4P78363 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA4P78363 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA4P78363 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCA4P78363 AC009053.2-201ENST00000563701 2365 ntBASIC13.96□□□□□ -0.17
ABCA4P78363 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
ABCA4P78363 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA4P78363 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA4P78363 AL589702.1-201ENST00000641229 1509 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms