Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 AL121912.1-201ENST00000603683 238 ntBASIC15.22■□□□□ 0.03
NR4A1P22736 AP001269.4-201ENST00000609611 512 ntBASIC15.22■□□□□ 0.03
NR4A1P22736 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NR4A1P22736 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 AP005117.1-201ENST00000584346 1413 ntBASIC15.22■□□□□ 0.03
NR4A1P22736 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.22■□□□□ 0.03
NR4A1P22736 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.22■□□□□ 0.03
NR4A1P22736 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
NR4A1P22736 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NR4A1P22736 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NR4A1P22736 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NR4A1P22736 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.21■□□□□ 0.03
NR4A1P22736 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NR4A1P22736 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NR4A1P22736 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.21■□□□□ 0.03
NR4A1P22736 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.21■□□□□ 0.03
NR4A1P22736 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.21■□□□□ 0.03
NR4A1P22736 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.21■□□□□ 0.03
NR4A1P22736 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.21■□□□□ 0.03
NR4A1P22736 MTDHP3-201ENST00000594186 672 ntBASIC15.21■□□□□ 0.03
NR4A1P22736 AC008608.2-201ENST00000606089 416 ntBASIC15.21■□□□□ 0.03
NR4A1P22736 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 AL355877.3-201ENST00000622820 899 ntBASIC15.21■□□□□ 0.03
NR4A1P22736 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NR4A1P22736 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NR4A1P22736 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.21■□□□□ 0.03
NR4A1P22736 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.21■□□□□ 0.03
NR4A1P22736 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR4A1P22736 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NR4A1P22736 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.21■□□□□ 0.02
NR4A1P22736 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR4A1P22736 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR4A1P22736 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NR4A1P22736 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NR4A1P22736 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.21■□□□□ 0.02
NR4A1P22736 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.21■□□□□ 0.02
NR4A1P22736 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NR4A1P22736 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.2■□□□□ 0.02
NR4A1P22736 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 AC026748.1-201ENST00000624349 3251 ntBASIC15.2■□□□□ 0.02
NR4A1P22736 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.2■□□□□ 0.02
NR4A1P22736 AP002490.2-201ENST00000524791 560 ntBASIC15.2■□□□□ 0.02
NR4A1P22736 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
NR4A1P22736 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 AL031008.1-201ENST00000619963 541 ntBASIC15.2■□□□□ 0.02
NR4A1P22736 AD001527.2-201ENST00000622994 785 ntBASIC15.2■□□□□ 0.02
NR4A1P22736 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 AP000867.4-201ENST00000641616 219 ntBASIC15.2■□□□□ 0.02
NR4A1P22736 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms