Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC068880.1-201ENST00000507289 2297 ntBASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 AC106820.2-201ENST00000563775 3264 ntBASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.39■■□□□ 1.01
CSB-PGBD3P0DP91 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 LINC01144-201ENST00000626198 1710 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 NOC2LP2-201ENST00000407594 1944 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 BRWD1P1-201ENST00000401091 371 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 MIR1908-201ENST00000410394 80 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AL442647.2-201ENST00000429864 857 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 BCRP2-202ENST00000447763 634 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 BCRP6-201ENST00000510112 632 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 BCRP7-201ENST00000511549 544 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 AL022328.1-201ENST00000610050 478 ntBASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.38■■□□□ 1.01
CSB-PGBD3P0DP91 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AC099336.1-201ENST00000417053 1171 ntBASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 AL391069.4-201ENST00000609583 481 ntBASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 MIR6787-201ENST00000616675 61 ntBASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CSB-PGBD3P0DP91 KRT8P44-201ENST00000441609 1350 ntBASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 ACTG1P3-201ENST00000431775 1114 ntBASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 AL359711.2-201ENST00000563105 872 ntBASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CSB-PGBD3P0DP91 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms