Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDKL5O76039 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL5O76039 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 LINC02199-201ENST00000506655 2702 ntBASIC18.92■□□□□ 0.62
CDKL5O76039 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CDKL5O76039 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.92■□□□□ 0.62
CDKL5O76039 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.92■□□□□ 0.62
CDKL5O76039 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL5O76039 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.92■□□□□ 0.62
CDKL5O76039 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 KRT8P23-201ENST00000560090 1207 ntBASIC18.92■□□□□ 0.62
CDKL5O76039 AC243562.1-201ENST00000560672 389 ntBASIC18.92■□□□□ 0.62
CDKL5O76039 AC024267.1-201ENST00000582320 895 ntBASIC18.92■□□□□ 0.62
CDKL5O76039 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL5O76039 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDKL5O76039 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDKL5O76039 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.92■□□□□ 0.62
CDKL5O76039 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL5O76039 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDKL5O76039 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDKL5O76039 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL5O76039 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL5O76039 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL5O76039 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.91■□□□□ 0.62
CDKL5O76039 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.91■□□□□ 0.62
CDKL5O76039 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 ALG1L5P-201ENST00000482043 771 ntBASIC18.91■□□□□ 0.62
CDKL5O76039 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.91■□□□□ 0.62
CDKL5O76039 AC079140.1-201ENST00000508039 487 ntBASIC18.91■□□□□ 0.62
CDKL5O76039 IGHV3-62-201ENST00000520057 340 ntBASIC18.91■□□□□ 0.62
CDKL5O76039 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.91■□□□□ 0.62
CDKL5O76039 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CDKL5O76039 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.91■□□□□ 0.62
CDKL5O76039 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.91■□□□□ 0.62
CDKL5O76039 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms