Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE3O75131 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE3O75131 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE3O75131 AC069120.2-201ENST00000524091 540 ntBASIC15.7■□□□□ 0.1
CPNE3O75131 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE3O75131 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE3O75131 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE3O75131 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE3O75131 AL158211.3-201ENST00000607385 239 ntBASIC15.7■□□□□ 0.1
CPNE3O75131 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE3O75131 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE3O75131 AC092068.3-201ENST00000587894 2016 ntBASIC15.7■□□□□ 0.1
CPNE3O75131 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 TREML5P-201ENST00000421694 576 ntBASIC15.69■□□□□ 0.1
CPNE3O75131 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.69■□□□□ 0.1
CPNE3O75131 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.69■□□□□ 0.1
CPNE3O75131 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE3O75131 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE3O75131 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.69■□□□□ 0.1
CPNE3O75131 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE3O75131 MIR4745-201ENST00000577608 62 ntBASIC15.69■□□□□ 0.1
CPNE3O75131 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 FO538757.1-201ENST00000623083 1397 ntBASIC15.69■□□□□ 0.1
CPNE3O75131 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE3O75131 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CPNE3O75131 PCDHA14-201ENST00000506751 2298 ntBASIC15.69■□□□□ 0.1
CPNE3O75131 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE3O75131 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE3O75131 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CPNE3O75131 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.68■□□□□ 0.1
CPNE3O75131 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.68■□□□□ 0.1
CPNE3O75131 RARRES2P9-201ENST00000565168 469 ntBASIC15.68■□□□□ 0.1
CPNE3O75131 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 AC079416.2-201ENST00000625035 1193 ntBASIC15.68■□□□□ 0.1
CPNE3O75131 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.68■□□□□ 0.1
CPNE3O75131 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CPNE3O75131 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms