Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 AL592424.1-201ENST00000563624 1536 ntBASIC15.53■□□□□ 0.08
DUX1O43812 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX1O43812 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.52■□□□□ 0.08
DUX1O43812 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
DUX1O43812 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 FO393414.2-201ENST00000405153 598 ntBASIC15.52■□□□□ 0.08
DUX1O43812 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 GNAQP1-201ENST00000444815 1067 ntBASIC15.52■□□□□ 0.08
DUX1O43812 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.52■□□□□ 0.08
DUX1O43812 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.52■□□□□ 0.08
DUX1O43812 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX1O43812 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.52■□□□□ 0.08
DUX1O43812 AL109936.8-201ENST00000641772 604 ntBASIC15.52■□□□□ 0.08
DUX1O43812 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX1O43812 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.52■□□□□ 0.07
DUX1O43812 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX1O43812 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 AL136982.4-201ENST00000437689 1740 ntBASIC15.51■□□□□ 0.07
DUX1O43812 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
DUX1O43812 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 OR8S1-201ENST00000310194 1080 ntBASIC15.51■□□□□ 0.07
DUX1O43812 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 COX5BP8-201ENST00000416911 349 ntBASIC15.51■□□□□ 0.07
DUX1O43812 NME2P1-201ENST00000426182 414 ntBASIC15.51■□□□□ 0.07
DUX1O43812 KRT17P7-201ENST00000451704 1104 ntBASIC15.51■□□□□ 0.07
DUX1O43812 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.51■□□□□ 0.07
DUX1O43812 AC055876.2-201ENST00000531834 546 ntBASIC15.51■□□□□ 0.07
DUX1O43812 API5-211ENST00000534695 560 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 AC074044.1-201ENST00000609673 707 ntBASIC15.51■□□□□ 0.07
DUX1O43812 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.51■□□□□ 0.07
DUX1O43812 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX1O43812 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX1O43812 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX1O43812 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX1O43812 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX1O43812 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DUX1O43812 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX1O43812 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX1O43812 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms