Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CEP290O15078 AC135050.7-201ENST00000624508 2218 ntBASIC17.31■□□□□ 0.36
CEP290O15078 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.31■□□□□ 0.36
CEP290O15078 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.31■□□□□ 0.36
CEP290O15078 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.31■□□□□ 0.36
CEP290O15078 AC091544.8-201ENST00000619490 361 ntBASIC17.31■□□□□ 0.36
CEP290O15078 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.31■□□□□ 0.36
CEP290O15078 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.31■□□□□ 0.36
CEP290O15078 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CEP290O15078 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 AC098935.1-201ENST00000446057 611 ntBASIC17.3■□□□□ 0.36
CEP290O15078 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.3■□□□□ 0.36
CEP290O15078 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CEP290O15078 AL023775.1-201ENST00000454907 1746 ntBASIC17.3■□□□□ 0.36
CEP290O15078 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 AC092068.3-201ENST00000587894 2016 ntBASIC17.3■□□□□ 0.36
CEP290O15078 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 AC106820.2-201ENST00000563775 3264 ntBASIC17.3■□□□□ 0.36
CEP290O15078 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.3■□□□□ 0.36
CEP290O15078 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.3■□□□□ 0.36
CEP290O15078 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CEP290O15078 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CEP290O15078 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.3■□□□□ 0.36
CEP290O15078 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CEP290O15078 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 AL133466.1-201ENST00000447582 150 ntBASIC17.29■□□□□ 0.36
CEP290O15078 IGLV3-15-201ENST00000518356 244 ntBASIC17.29■□□□□ 0.36
CEP290O15078 PGAM1P5-201ENST00000548011 764 ntBASIC17.29■□□□□ 0.36
CEP290O15078 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 AC145423.3-201ENST00000615987 467 ntBASIC17.29■□□□□ 0.36
CEP290O15078 AC006453.4-201ENST00000636949 1252 ntBASIC17.29■□□□□ 0.36
CEP290O15078 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
CEP290O15078 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 CEP164P1-201ENST00000455142 418 ntBASIC17.29■□□□□ 0.36
CEP290O15078 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.29■□□□□ 0.36
CEP290O15078 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CEP290O15078 AC009084.3-201ENST00000623356 437 ntBASIC17.29■□□□□ 0.36
CEP290O15078 BX539320.1-201ENST00000623759 877 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms