Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 KRT18P1-202ENST00000452408 1331 ntBASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 AP005117.1-201ENST00000584346 1413 ntBASIC15.26■□□□□ 0.03
TCRBV3S1A0A5B6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 AL596275.1-201ENST00000423464 877 ntBASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 AC022616.7-201ENST00000525383 220 ntBASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 AC092127.1-201ENST00000567093 3455 ntBASIC15.25■□□□□ 0.03
TCRBV3S1A0A5B6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 PI4KAP1-204ENST00000612579 1703 ntBASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 AC104076.2-201ENST00000448912 469 ntBASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 TOB2P1-201ENST00000469761 992 ntBASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms