Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 KLF2P3-201ENST00000451977 1087 ntBASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AC013467.2-201ENST00000605472 835 ntBASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AL035252.4-201ENST00000624174 288 ntBASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 AC063926.3-201ENST00000624734 5658 ntBASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FNDC3AQ9Y2H6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 MIR661-201ENST00000384842 89 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC107890.1-201ENST00000422478 521 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC005034.1-201ENST00000426657 489 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC002472.2-201ENST00000442739 958 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC125807.1-201ENST00000483097 614 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 SNX33P1-201ENST00000592116 1762 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FNDC3AQ9Y2H6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 SPCS2P4-201ENST00000436160 681 ntBASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 RBPMS2P1-201ENST00000437762 623 ntBASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FNDC3AQ9Y2H6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms