Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC005225.4-201ENST00000557330 545 ntBASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC012645.4-201ENST00000610691 1061 ntBASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 SPDYE12P-201ENST00000618416 771 ntBASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC063926.2-201ENST00000623766 1308 ntBASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AL671710.1-201ENST00000610245 2349 ntBASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 HYMAI-201ENST00000635591 3347 ntBASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PRYP6-201ENST00000514804 343 ntBASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 AC007967.4-201ENST00000614700 386 ntBASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 AL138828.2-201ENST00000615812 383 ntBASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC6Q9UBN7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 AC124947.2-201ENST00000547118 1133 ntBASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.41■□□□□ 0.54
HDAC6Q9UBN7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 AC007950.2-201ENST00000615045 2347 ntBASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 AL596257.1-201ENST00000641463 2694 ntBASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms