Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 KRT18P67-201ENST00000432816 1264 ntBASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 AL160237.2-201ENST00000556165 472 ntBASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 CLEC4GP1-201ENST00000596555 870 ntBASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 AC112504.1-201ENST00000623415 1841 ntBASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 U82695.1-201ENST00000635752 1889 ntBASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.12■□□□□ 0.01
POLR2J3Q9H1A7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 AC108073.2-201ENST00000464002 357 ntBASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 AL121912.1-201ENST00000603683 238 ntBASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
POLR2J3Q9H1A7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
POLR2J3Q9H1A7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms