Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC110588.1-201ENST00000559699 137 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 SYPL1P2-201ENST00000582878 727 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC01764-201ENST00000587970 380 ntTSL 4 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC006116.10-201ENST00000591836 581 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC099785.1-201ENST00000605697 437 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AL355802.3-201ENST00000607571 545 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 TBC1D3J-201ENST00000620719 1426 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC024580.2-201ENST00000623363 231 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 RASSF1-AS1-201ENST00000629828 790 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-3Q9BYR6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 Z93929.1-201ENST00000418200 1475 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AL359715.4-201ENST00000606629 1436 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 RNU6-259P-201ENST00000383999 107 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 MIR181A1-201ENST00000385026 110 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 RPL17P50-201ENST00000396131 546 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 TCEA1P4-201ENST00000415066 844 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 CHCHD4P5-201ENST00000436684 427 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 RPL5P10-201ENST00000445207 894 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 DNAJC19-205ENST00000479269 610 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC147055.3-201ENST00000510547 851 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC092593.2-201ENST00000513866 913 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 MTCO2P24-201ENST00000515611 426 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AP001496.2-202ENST00000579933 977 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC119396.2-201ENST00000596946 363 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 7SK.7-201ENST00000603504 247 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AP001521.2-201ENST00000608772 546 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC012594.1-251ENST00000609666 895 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 Metazoa_SRP.40-201ENST00000611671 282 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC090617.9-201ENST00000623751 147 ntBASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 FAM49A-202ENST00000406434 1386 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-3Q9BYR6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms