Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 PRORSD1P-202ENST00000563365 2154 ntBASIC17.54■□□□□ 0.4
LRCH3Q96II8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH3Q96II8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.54■□□□□ 0.4
LRCH3Q96II8 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 MIR4750-201ENST00000584564 56 ntBASIC17.53■□□□□ 0.4
LRCH3Q96II8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 AC244669.2-201ENST00000612320 853 ntBASIC17.53■□□□□ 0.4
LRCH3Q96II8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH3Q96II8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH3Q96II8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 SPDYE17-201ENST00000412399 783 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 AL355864.2-201ENST00000447420 863 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 RN7SL399P-201ENST00000471648 279 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 PTP4A1P2-201ENST00000546033 454 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 HLA-C-210ENST00000640219 976 ntBASIC17.52■□□□□ 0.4
LRCH3Q96II8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH3Q96II8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH3Q96II8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LRCH3Q96II8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms