Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM43Q96BQ3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TRIM43Q96BQ3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM43Q96BQ3 PCGF3-213ENST00000620529 1899 ntBASIC17.46■□□□□ 0.38
TRIM43Q96BQ3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM43Q96BQ3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.46■□□□□ 0.38
TRIM43Q96BQ3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 CNN2P8-201ENST00000421872 913 ntBASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 AP002490.2-201ENST00000524791 560 ntBASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 KRT8P37-201ENST00000451609 1420 ntBASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM43Q96BQ3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 AC067852.2-201ENST00000590513 2313 ntBASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 AC020763.4-201ENST00000623414 4170 ntBASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM43Q96BQ3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms