Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PGBD3Q8N328 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PGBD3Q8N328 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PGBD3Q8N328 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PGBD3Q8N328 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PGBD3Q8N328 KRT8P39-201ENST00000396270 1433 ntBASIC16.53■□□□□ 0.24
PGBD3Q8N328 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.53■□□□□ 0.24
PGBD3Q8N328 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 COX5BP8-201ENST00000416911 349 ntBASIC16.53■□□□□ 0.24
PGBD3Q8N328 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 AC009477.1-201ENST00000452936 217 ntBASIC16.53■□□□□ 0.24
PGBD3Q8N328 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 AC009407.1-201ENST00000568958 598 ntBASIC16.53■□□□□ 0.24
PGBD3Q8N328 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.53■□□□□ 0.24
PGBD3Q8N328 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.53■□□□□ 0.24
PGBD3Q8N328 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PGBD3Q8N328 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 AC106820.2-201ENST00000563775 3264 ntBASIC16.52■□□□□ 0.24
PGBD3Q8N328 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 AC106886.4-201ENST00000623557 2502 ntBASIC16.52■□□□□ 0.24
PGBD3Q8N328 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD3Q8N328 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 HLA-J-202ENST00000469281 1241 ntBASIC16.52■□□□□ 0.24
PGBD3Q8N328 AL079307.3-201ENST00000556114 283 ntBASIC16.52■□□□□ 0.24
PGBD3Q8N328 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 AC013467.2-201ENST00000605472 835 ntBASIC16.52■□□□□ 0.24
PGBD3Q8N328 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.52■□□□□ 0.24
PGBD3Q8N328 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD3Q8N328 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD3Q8N328 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PGBD3Q8N328 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD3Q8N328 CU639417.3-201ENST00000624240 1404 ntBASIC16.52■□□□□ 0.23
PGBD3Q8N328 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
PGBD3Q8N328 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD3Q8N328 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms