Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC245100.5-201ENST00000452108 331 ntBASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 SERBP1P3-201ENST00000459980 809 ntBASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 AC044860.1-202ENST00000559481 777 ntBASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC60Q8IWA6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC60Q8IWA6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC60Q8IWA6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC60Q8IWA6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC60Q8IWA6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CCDC60Q8IWA6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC60Q8IWA6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 HIST3H2BA-201ENST00000436555 524 ntBASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 AC004790.1-201ENST00000612686 536 ntBASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
CCDC60Q8IWA6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AC092364.2-201ENST00000596710 2692 ntBASIC18■□□□□ 0.47
CCDC60Q8IWA6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AL691432.1-201ENST00000596308 1422 ntBASIC18■□□□□ 0.47
CCDC60Q8IWA6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 SPDYE18-201ENST00000510091 1050 ntBASIC18■□□□□ 0.47
CCDC60Q8IWA6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC60Q8IWA6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC60Q8IWA6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CCDC60Q8IWA6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC60Q8IWA6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CCDC60Q8IWA6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CCDC60Q8IWA6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC60Q8IWA6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC60Q8IWA6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms