Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 AC011676.5-201ENST00000624864 2660 ntBASIC18.11■□□□□ 0.49
TRIM50Q86XT4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 FLJ38576-201ENST00000623820 2459 ntBASIC18.1■□□□□ 0.49
TRIM50Q86XT4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 AL136982.4-201ENST00000437689 1740 ntBASIC18.1■□□□□ 0.49
TRIM50Q86XT4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 KRT8P12-202ENST00000472924 1397 ntBASIC18.1■□□□□ 0.49
TRIM50Q86XT4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 AC026979.3-201ENST00000607315 403 ntBASIC18.1■□□□□ 0.49
TRIM50Q86XT4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.1■□□□□ 0.49
TRIM50Q86XT4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 AC079328.2-201ENST00000561241 3354 ntBASIC18.1■□□□□ 0.49
TRIM50Q86XT4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM50Q86XT4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 AC007541.1-201ENST00000570282 1469 ntBASIC18.09■□□□□ 0.49
TRIM50Q86XT4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TRIM50Q86XT4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms